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References and Extra Reading on Mutation
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Chen, R.S., Boeger, J.M., McDonald, B.A. 1994. Genetic stability in a population of a plant pathogenic fungus over time. Molecular Ecology 3:209-218.
Goodwin, S.B., Cohen, B.A., Fry, W.E. 1994. Panglobal distribution of a single clonal lineage of the Irish potato famine fungus. Proc. Natl. Acad. Sci. USA 91: 11591-11595.
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Zhan, J., Mundt, C.C., McDonald B.A. 2001. Using restriction fragment length polymorphisms to assess temporal variation and estimate the number of ascospores that initiate epidemics in field populations of Mycosphaerella graminicola.Phytopathology 91:1011-1017.
Zhan, J., Pettway, R.E., McDonald B.A. 2003. The global genetic structure of the wheat pathogen Mycosphaerella graminicola is characterized by high nuclear diversity, low mitochondrial diversity, regular recombination, and gene flow. Fungal Genetics and Biology 38:286-297.
Bentley, S., Pegg, K.G., Moore, N.Y., Davis, R.D., Buddenhagen, I.W. 1998. Genetic variation among vegetative compatibility groups of Fusarium oxysporum f. sp. cubense analyzed by DNA fingerprinting. Phytopathology 88:1283-1293.
Boeger, J.M., Chen, R.S., McDonald, B.A. 1993. Gene flow between geographic populations of Mycosphaerella graminicola (anamorph Septoria tritici) detected with RFLP markers. Phytopathology 83:1148-1154.
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McDermott, J.M., McDonald, B.A. 1993. Gene flow in plant pathosystems. Annual Review of Phytopathology 31:353-373.
Zhan, J., Pettway, R.E., McDonald B.A. 2003. The global genetic structure of the wheat pathogen Mycosphaerella graminicola is characterized by high nuclear diversity, low mitochondrial diversity, regular recombination, and gene flow. Fungal Genetics and Biology 38:286-297.
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Zhan, J., Mundt, C.C., Hoffer, M.E., McDonald, B.A. 2002. Local adaptation and effect of host genotype on the rate of pathogen evolution: an experimental test in a plant pathosystem. Journal of Evolutionary Biology 15:634-647.
Baayen, R.P., Forch, M.G., Waalwijk, C., Bonants, P.J.M., Loffler, H.J.M., Roebroeck, E.J.A. 1998. Pathogenic, genetic and molecular characterisation of Fusarium oxysporum f.sp. lilii. European Journal of Plant Pathology104:887-894.
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Burdon, J.J., Silk, J. 1997. Sources and patterns of diversity in plant-pathogenic fungi. Phytopathology 87:664-669Gordon, T.R., Martyn, R.D. 1997. The evolutionary biology of Fusarium oxysporum. Annual Review of Phytopathology 35:111-128.
Jimenez-Gasco, M.M., Milgroom, M.G., Jimenez-Diaz, R.M. 2002. Gene genealogies support Fusarium oxysporum f. sp ciceris as a monophyletic group. Plant Pathology 51:72-77.
Koenig, R.L., Ploetz, R.C., Kistler, H.C. 1997. Fusarium oxysporum f. sp. cubense consists of a small number of divergent and globally distributed clonal lineages. Phytopathology 87:915-923.
Leung, H., Nelson, R.J., Leach, J.E. 1993. Population structure of plant pathogenic fungi and bacteria. Advances in Plant Pathology 10:157-205.
Linde, C., Zhan, J., and B. A. McDonald. 2002. Population structure of Mycosphaerella graminicola: From lesions to continents. Phytopathology 92:946-955.
McDonald, B.A., McDermott, J.M. 1993. The population genetics of plant pathogenic fungi. BioScience 43:311-319.
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Milgroom, M.G. 1995. Analysis of population structure in fungal plant pathogens. pp. 213-230 in Disease Analysis through Genetics and Biotechnology: Interdisciplinary Bridges to Improved Sorghum and Millet Crops. J.F. Leslie, R.A. Frederiksen, eds. Iowa State University Press.
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Zhan, J., Pettway, R.E., McDonald B.A. 2003. The global genetic structure of the wheat pathogen Mycosphaerella graminicola is characterized by high nuclear diversity, low mitochondrial diversity, regular recombination, and gene flow. Fungal Genetics and Biology 38:286-297.
Zhan, J., Mundt, C.C., McDonald, B.A. 1998. Measuring immigration and sexual reproduction in field populations of Mycosphaerella graminicola. Phytopathology 88:1330-1337.
References and Extra Reading on Applications
Garcia-Arenal, G., McDonald, B.A. 2003. an analysis of the durability of resistance to plant viruses. Phytopathology 93:941-952. Detailed information on the pathosystems analyzed, showing how risk categories were assigned and how breakdown or durability of resistance was determined. Click here for this supplement.
McDonald, B.A., Linde, C. 2002. Pathogen population genetics, evolutionary potential, and durable resistance. Annual Review of Phytopathology 40:349-379.
Milgroom, M.G., Fry, W.E. 1997. Contributions of population genetics to plant disease epidemiology and management. Advances in Botanical Research 24:1-30.
