James M. Crosslin
Research Plant Pathologist, USDA-ARS, Vegetable and Forage Crops Research Unit, 24106 North Bunn Road, Prosser, WA 99350
Joseph E. Munyaneza
Research Entomologist, USDA-ARS, Yakima Agricultural Research Laboratory, 5230 Konnowac Pass Road, Wapato, WA 98951
Judith K. Brown, Professor, School of Plant Sciences, The University of Arizona, Tucson, AZ 85721
Lia W. Liefting, Plant Pathologist, Plant Health and Environment Laboratory, MAF Biosecurity New Zealand, P.O. Box 2095, Auckland 1140, New Zealand
Corresponding author: Jim.Crosslin@ARS.USDA.GOV
Crosslin, J., Munyaneza, J., Brown, J., Liefting, L. 2010. A History in the Making: Potato Zebra Chip Disease Associated with a New Psyllid-borne Bacterium -- A Tale of Striped Potatoes. Online. APSnet Features. doi:10.1094/APSnetFeature-2010-0110.
In the mid- to late 1990s, potato tubers produced in Mexico were observed that displayed distinct internal brown discoloration when sliced and unacceptable dark stripes and streaks when the affected tubers were processed to produce potato chips. The name "zebra chip" (ZC) was used to describe the disease and this designation has become well established in the literature. Some researchers have also proposed the name "zebra complex" and, luckily, this also can be abbreviated ZC! By about 2000, similar symptoms were observed in Texas-grown potatoes and many growers suffered serious economic losses because these tubers were rejected by processors and entire fields were often abandoned.
In about 2008, tomato plants were observed in California with an unknown disease and a novel bacterium was shown to be associated with the symptomatic plants. The California researchers subsequently detected this new bacterium in diseased potatoes. The bacterium was also found to be associated with the potato-tomato psyllid (Bactericera cockerelli). A similar set of circumstances was also reported in New Zealand greenhouse tomato and pepper crops in 2008 (14), and in 2007 in psyllid-infested greenhouse-grown tomatoes in Arizona (2).
This article examines briefly the history of this disease, symptomatology, hosts, distribution, and the recent association of an insect-transmitted bacterium with the ZC disease of potato and diseases of other solanaceous crops in multiple locations worldwide.
Early Descriptions of the Disease and Start of Research
Fig. 1. Chlorosis and purpling of zebra chip plants at a trial in Weslaco, TX.
In the mid 1990s, an apparently new affliction of potatoes was observed in Mexico and parts of Central America (6,11,30). Foliar symptoms resembled those caused by phytoplasmas, including upward rolling of the leaflets, purple or yellow discoloration, aerial tubers, leaf scorch, and early senescence (Figs. 1, 2, and 3). The fresh tubers showed brown discoloration when cut (Fig. 4) and, upon slicing and frying to produce potato chips, showed very dark blotches, stripes, or streaks (Fig. 5). Often, these streaks coincided with the medullary rays of the tuber. The presence of these characteristic stripes and streaks led to adoption of the common name "zebra chip." By 2000, these symptoms were observed in US potato fields, particularly in the Pearsall and lower Rio Grande valley areas of Texas, and by 2004-2005 the disease was causing significant economic damage in these areas (see the PDF from Center for North American Studies). By 2007, there were reports of similar symptoms being observed in potatoes grown in Nebraska, Colorado, Kansas, New Mexico, Arizona, Nevada, and California (21). Also, in 2006-2007, potatoes grown in Honduras were observed that had foliar and tuber symptoms resembling those of zebra chip. In Honduras in 2009, some fields were severely affected and were total losses because of unmarketable tubers (Fig. 6) (26).
Fig. 2. "Purple top" -like symptoms of zebra chip plant.
Fig. 3. Severe chlorosis and scorch of zebra chip plant.
Fig. 4. Browning of freshly cut tuber of cv. FL1867 affected by zebra chip. These tubers were collected from a commercial field in Texas.
Fig. 5. Severe zebra chip symptoms in processed chips.
Fig. 6. Potato field in Honduras during 2009 that is severely affected by zebra chip disease. This field experienced 100% infection early in the season and was a total loss.
In the summer of 2005, we (JMC, JEM) were contacted by personnel at FritoLay, Inc. who were seeing the symptoms described above in tubers grown in their Texas production areas. Because the foliar symptoms resembled those caused by phytoplasmas, symptomatic shoot and tuber samples were tested by conventional nested PCR for phytoplasmas (20) and all were negative. At about the same time, samples from Texas were sent to other plant pathology laboratories and similarly tested for phytoplasmas, with the same negative result (31). These results indicated that ZC differed from a similar potato disease, "purple top," that was associated with a phytoplasma infection occurring in Texas and Nebraska at about the same time (29). Numerous additional tests for Tomato spotted wilt virus, Tobacco rattle virus, Alfalfa mosaic virus, Potato leafroll virus, Potato mop top virus, Potato virus Y, Xylella fastidiosa, and Serratia marcescens were all negative (25).
In conjunction with the molecular tests described above, in the fall of 2005 and winter of 2006 symptomatic potato shoots were tip-grafted onto various potato cultivars to determine if there was some infectious agent that could be transmitted to healthy potato. Approximately 4 weeks after grafting, most of the recipient plants began to display symptoms similar to the original plants (Fig. 7) and tubers harvested from the grafted plants showed the characteristic discoloration associated with ZC (Fig. 8) (5). Similar grafting results were obtained by other laboratories (31). These results strongly suggested that a pathogen was involved in the ZC disease, although none had yet been identified.
Fig. 7. Zebra chip symptoms in potato cv. Atlantic 60 days after grafting with a zebra chip symptomatic shoot.
Fig. 8. Zebra chip symptoms in freshly cut tuber from plant grafted with ZC symptomatic shoot (right). Tuber from a plant grafted with a healthy potato shoot is on the left.
Association of the Potato-tomato Psyllid with the Disease
Fig. 9. Cages used to contain or exclude psyllids, Weslaco, TX 2008.
Since the symptoms of ZC resembled those of a phytoplasma infection, potential vector insects were collected from affected fields in south Texas beginning in 2005-2006. However, few leafhoppers, the primary vectors of phytoplasmas, were observed. The predominant insect collected at these sites was identified as the potato-tomato psyllid, Bactericera cockerelli (Sulc) (10). The potato psyllid has piercing-sucking mouthparts and is about the same size as a winged aphid. (Photographs of the potato psyllid can be viewed from www.insectimages.org). Many psyllids were tested by PCR for phytoplasmas, usually in groups of five, and only a small percentage of these were positive, providing evidence that the psyllid was not an important vector of phytoplasmas (20,21). Studies were subsequently undertaken where psyllids were introduced into cages containing potato plants and plants were observed for production of ZC symptoms (Fig. 9). Most of the infested plants developed ZC foliar symptoms and the tubers also showed the characteristic discoloration (20,21). Later, more extensive cage trials with psyllids derived from numerous sources gave similar results. However, infestation with psyllids from some sources did not result in ZC-symptomatic plants (18). This result suggested that some populations of psyllids were free of the as-yet unidentified pathogen. Some "yellows" type symptoms were produced in the plants by psyllid infestation and this was postulated to be the result of psyllid feeding itself, as the presence of a toxin associated with the psyllid has been proposed for many decades (3,7,27). Also, psyllid feeding by itself can cause some necrotic symptoms in tubers (28,33).
Identification of the Putative Causal Agent, Geographic Distribution, and Additional Hosts
In January of 2008, scientists at the Plant Health and Environment Laboratory, MAF Biosecurity New Zealand, began an investigation to determine the etiology of a new disease of glasshouse-grown tomato (Solanum lycopersicum) and pepper (Capsicum annuum) crops (14), unaware of the connection with ZC. All diseases known to affect tomato and pepper were ruled out, including pathogenic fungi, culturable bacteria, viruses, viroids and phytoplasmas. The symptoms looked very similar to those caused by phytoplasmas and, therefore, attempts to find another kind of bacterium-like organism were pursued. The first breakthrough came in April 2008 when transmission electron microscopy of thin sections of leaf tissue from symptomatic tomato plants revealed the presence of phloem-limited bacterium-like organisms. Various PCR primers were used in different combinations to amplify putative prokaryotic DNA extracted from both healthy and symptomatic plants. In May 2008, one of the primer combinations produced a unique PCR amplicon from symptomatic plants only. Sequence analysis of this fragment revealed that it shared high identity with bacteria related to the Candidatus Liberibacter species, the causal agents of citrus greening (huanglongbing) disease. On 4 June 2008, MAF Biosecurity issued a press release on this new bacterium. The possible link between the tomato and pepper diseases and ZC became apparent when a potato breeder in New Zealand contacted MAF Biosecurity New Zealand soon after their press release. The breeder reported unusual foliar and tuber symptoms and that high numbers of the potato psyllid were observed in his potato crops that season. Tubers collected from the potato breeder subsequently tested positive for the liberibacter (13). Over the next year, various researchers also reported detection of the liberibacter in potatoes showing ZC symptoms in the US (1,14,17,22,31), supporting the argument that the liberibacter is associated with the ZC disease. Workers in New Zealand named the new liberibacter species "Candidatus Liberibacter solanacearum," the epithet referring to the family of plant hosts from which the bacterium has been identified (16).
Meanwhile, Allison Hansen, a doctoral student in the Department of Entomology, University of California at Riverside, detected the Ca. Liberibacter through her research on symbionts of the potato psyllid. Universal prokaryote rRNA primers were initially used to amplify DNA from a "symbiont" from potato psyllids. The resulting 2.6 kbp DNA fragment was sequenced, enabling the design of specific primers to amplify and sequence smaller fragments of this region. These researchers tentatively designated the bacterium "Candidatus Liberibacter psyllaurous" and it was so-named for its association with psyllid yellows (12). Recent evidence, however, suggests that ZC results when the Ca. Liberibacter is transmitted by the potato psyllid to a suitable host and that psyllid yellows results from the feeding of liberibacter-free psyllids (32).
Similar to the research efforts on potato and tomato diseases in New Zealand and at U.C. Riverside described above, in the summer of 2006 tomato plants in a large commercial greenhouse facility in northern Arizona exhibited dark green veins and interveinal chlorosis, foliar curling, and shortened internodes. Research failed to reveal the presence of well-studied DNA or RNA viruses, leading to the hypothesis that a phytoplasma might be involved. A second puzzling observation was that the major insect infesting these tomato plants was the potato-tomato psyllid. Initial PCR tests using various primer pairs designed to amplify the 16S rRNA of phytoplasmas failed to yield a specific product from symptomatic, psyllid-infested tomato plants. Discussions with a number of colleagues resulted in the application of a new PCR primer set for phytoplasma detection. Using these primers, followed by cloning and DNA sequencing of PCR products, three of 15 amplicons from symptomatic tomatoes had a closest match to the 16S rDNA sequence for the three recognized "Candidatus Liberibacter" bacterial species in the citrus greening complex. Redesign of PCR primers that were based on the Ca. L. asiaticus-like sequences resulted in amplification of a fragment of the 16S rDNA of the Ca. Liberibacter-like bacterium detected in the tomato samples. PCR also confirmed the presence of the bacterium in potato-tomato psyllids reared on laboratory tomato plants initially established from cuttings of symptomatic plants taken from the greenhouse in northern Arizona, thus, confirming psyllid acquisition of the bacterium (2). Additional PCR assays confirmed the presence of the bacterium in potato samples from Honduras collected in 2006-2007 that exhibited foliar yellowing, internal browning of the tubers, and tuber development on the primary stem at ground level, all of which are symptoms consistent with the ZC disease (Fig. 10) (26).
Fig. 10. Tubers growing abnormally at ground level on the main stem of a potato plant. This plant was from Honduras.
This ZC-associated bacterium, if indeed only one "species" is involved, has also been detected in other solanaceous plants in New Zealand including tamarillo (Solanum betaceum) and cape goose berry (Physalis peruviana) [(15), en.wikipedia.org] and chili (Capsicum sp.). The bacterium was also recently reported infecting tomatoes and peppers in Mexico (23,24). Additionally, we have successfully transmitted our ZC liberibacter to Datura spp. by grafting (unpublished). These results suggest that numerous solanaceous plants are potential, if not natural, hosts of the bacterium due to the feeding preference of the potato-tomato psyllid.
Various research groups have cloned and sequenced portions of the 16S and 23S ribosomal RNA genes (rDNA) and some of the ribosomal protein genes of the liberibacter. Sequence analysis suggests that "psyllaurous" and "solanacearum" are the same bacterium, however a few minor differences in their sequences have been reported, suggesting the occurrence of more than one variant of this bacterium (16,29). Subsequent studies to examine additional regions of the genome of the ZC Ca. Liberibacter will increase our understanding of the extent of diversity within this bacterium. What is now clear from the sequence information is that the ZC bacterium, a member of the alphaproteobacteria, is most closely related to "Candidatus Liberibacter asiaticus," "Candidatus Liberibacter africanus," and "Candidatus Liberibacter americanus," bacteria that are associated with the serious citrus greening (huanglongbing) disease in Asia, Africa, and the Americas (12,14,17).
Evidence suggests that the Ca. Liberibacter from potato and tomato is naturally transmitted both horizontally from plant to plant by the psyllid vector and vertically (transovarially) in the psyllid population (12). This capability of the bacterium has broad epidemiological implications since an "overwintering host" for the bacterium may not be needed to sustain the pathogen. Rather, an established population of the psyllid host would maintain the pathogen, at least at some level, which would be subsequently transmitted to susceptible crops the following season, thereby serving as a primary source of inoculum for acquisition by bacteria-free psyllids.
Perspectives and Future Outlook
From the discussion above, it is apparent that the Ca. Liberibacter and the potato zebra chip disease and the diseases of tomatoes and peppers would appear to be relatively "new arrivals," at least in the US and New Zealand. This raises the questions of its origins and what it could potentially mean to potato, tomato, and pepper production in the US, Mexico, Central America, New Zealand, and wherever it emerges next. The effect of the Ca. Liberibacter on a long-lived tree crop such as tamarillo has already been obvious with death of the tree occurring within several months after appearance of the first symptoms. Indeed, the apparently rapid spread of the disease in the US and the introduction into New Zealand (the potato-tomato psyllid was first reported in 2006) would suggest that this insect-pathogen complex has the potential for rapid spread with devastating consequences. In the Pacific Northwest, where nearly half of US potatoes are produced, potato-tomato psyllids are seasonally present (19). However, they "arrive" in late July or August, which is near the end of the potato-growing season. The origin of these migrating psyllids has not been determined (19). The ZC Ca. Liberibacter was recently confirmed in California (4) and poses a significant threat in that area because of the widespread occurrence of the potato-tomato psyllid in that region. The potato-tomato psyllid is known to occur in most of the western US and parts of Canada and it is just a question of how late in the season it arrives each year. Studies in Texas and Washington suggest that earlier infection in potato result in more severe symptoms compared to infections that occur later in the season. If plants are infected late enough in the season the effects are minimized. However, should the potato-tomato psyllid be able to overwinter as either eggs or adults in milder climates in other potato growing regions of the US or other countries, then the impact could be severe since the crop would be infested at an early growth stage.
Currently, growers of chipping potatoes in Texas are vigorously scouting for the potato-tomato psyllid using yellow sticky traps and/or sweep nets. The psyllid is being targeted with aggressive insecticide programs and this has greatly reduced the damage caused by ZC in this region compared to 2004-2005 (8,9). Ultimately, the psyllid may develop resistance to some of the compounds being recommended for control and this may limit future control options (8,9). University of California guidelines for management of the potato psyllid are available from UC IPM Pest Management Guidelines.
The New Zealand and Arizona experience with potato-tomato psyllids transmitting the bacterium to greenhouse tomatoes and peppers underscores the potential of this psyllid-bacterial pathogen complex to cause economic damage outside of a field setting. Quarantine considerations have also emerged, since some countries are now requiring specific testing for liberibacter prior to allowing shipment of potatoes to those countries (Crosslin, unpublished). Furthermore, Australia banned the importation of fresh tomato and pepper from New Zealand for 6 months. When international trade resumed, additional quarantine requirements had been put in place by Biosecurity Australia where growers need to ensure that crops for export have been produced in areas free from the potato-tomato psyllid or the exported produce must be free of the psyllid. The Australian market for fresh tamarillos from New Zealand was temporarily closed but has recently reopened. Although the exact method by which the potato-tomato psyllid and liberibacter entered New Zealand is unknown, one plausible scenario would be as psyllid eggs on plant material. The occurrence of the potato-tomato psyllid in greenhouses in Arizona and New Zealand described above, and in greenhouses in Ontario, Canada (see website of the Government of Ontario) suggest that psyllid-infested tomato (or other hosts) plantings in commercial greenhouses could serve as important "overwintering" sources of the psyllid and bacterial pathogen for subsequent migration to other crops.
Information about the potato-tomato psyllid and its association with Ca. Liberibacter is beginning to accumulate, but many important details about the epidemiology and of pathogen-vector interactions are scanty or lacking entirely. It is expected that during the next few years new information will aid efforts to eliminate "striped potatoes" and the apparently related diseases of tomato, pepper, and other important solanaceous crops.
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Related Online Resources
MAF Biosecurity New Zealand:
Association of the liberibacter with diseases of tomato and
pepper in New Zealand
Potato Product Group of Horticulture New Zealand:
Information on the zebra chip disease on potatoes focused on the New Zealand experience
Texas A & M University:
Information on zebra chip
European Plant Protection Organization (EPPO):
Information on zebra chip liberibacter