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Instructions to Authors
PDF version for
printing
NOTE: This journal does not accept Microsoft Word 2007 documents at this
time. Please use Word's "Save As" option to save your document as an older
(.doc) file type.
NOTE: New Electronic Submission Procedure
Phytopathology has adopted an electronic submission system that will
speed the handling of your manuscript and allow you to check on its status
at any time during the review process. See complete instructions under
“Guidelines for Electronic Manuscript Submission.”
General Publication Policies
Manuscripts may be submitted for consideration of publication in
Phytopathology by members of The American Phytopathological Society and
by nonmembers. Membership in the Society is not a prerequisite for
publication in the journal, but page charges are higher for nonmembers than
for members.
Submission of manuscripts. Submit manuscripts electronically, following
closely the directions given below. Manuscripts will be assigned to
an appropriate Senior Editor, who will solicit reviews and make a decision
regarding suitability of the submission for publication. Submission implies
nonsubmission elsewhere and (if accepted) no publication elsewhere in the
same form without consent.
Authors are encouraged to include illustrations (photographs, drawings, or
diagrams) from an article or related to an article that they would like to
have considered for the cover of the journal. Such figures should be labeled
and include a caption.
Content. Contributions should fall into the following categories: (i)
Original research on some aspect of plant pathology. (ii) Mini-Reviews:
Short reviews of contemporary concepts or developments in the field of plant
pathology. Mini-reviews should be discussed with the editor-in-chief prior
to submission. (iii) Letters to the Editor: Explain, amplify, or otherwise
comment on research published in the journal or elsewhere. The Editorial
Board reserves the right to reject or publish letters of rebuttal when
appropriate. (iv) Obituaries. Original research papers, Mini-Reviews, and
Letters to the Editor are all subject to the review policies of the journal.
The emphasis in Phytopathology is on research that advances
understanding of the nature of plant diseases, the agents that cause them,
their spread, the losses they cause, and measures that can be used to
control them. Manuscripts should fit into one of the sections of the
journal, which are listed below. Subjects
appropriate for the journal include (but are not limited to): cell,
molecular, and population biology of plant pathogens (fungi, bacteria,
viruses, nematodes, parasitic plants); biology of biocontrol agents and
pathogen vectors; cell, molecular, and population biology of plant–pathogen
interactions; physiology and biochemistry of plant–pathogen interactions;
plant and pathogen genetics; plant disease resistance; ecology, modeling,
and epidemiology of diseases; disease etiology; disease control and pest
management; and plant stress and abiotic disorders. Acceptance depends on
the originality of the work, soundness of organization of the manuscript,
reliability of the methods in terms of their adequacy to support
conclusions, clarity of presentation, validity of the reasoning in deriving
the conclusions, and the possibility of alternative interpretations. Authors
should display an awareness of previously published information on the same
subject and relate their findings to it. Appropriate statistical analyses
should be included. In general, an article in which the conclusions are
based on unrepeated experiments is unacceptable.
Page charges. Because of the high cost of publishing articles in
Phytopathology, payment of page charges is mandatory. Page charges are
subject to change without notice. Current charges are $50 per printed page
for the first six pages and $80 per printed page for each additional page
for members of The American Phytopathological Society and $130 per printed
page for nonmembers. In addition, there is a $20 fee charged for each
black-and-white figure or line drawing. Cost of color: one page of color
containing one figure, $1,300; each additional page of color containing one
figure each, $600; each additional figure on any one page, $200. The author
is billed after the article is printed in the journal.
GUIDELINES FOR ELECTRONIC MANUSCRIPT SUBMISSION
Phytopathology now requires that all manuscripts be submitted
electronically via an Internet service called Manuscript Central in order to
be considered for publication. Electronic submission speeds the handling of
your manuscript and allows you to monitor its status at any time during the
review process.
Procedure. Type
http://mc.manuscriptcentral.com/Phytopathology in y our
internet browser to bring up the log-in screen. First-time users must create
an account. Follow the on-screen directions to create your account and
submit your manuscript. Text files can be in Word, WordPerfect, Rich Text,
or most common word-processing programs. Figures should be submitted in
.tif, .eps, or .jpg format. Detailed instructions are found below.
Technical problems. Assistance with technical difficulties in
submission is available from ScholarOne, Inc., the parent company of
Manuscript Central. First, however, click the “Get Help Now” button on your
screen and consult “FAQs” (frequently asked questions), or contact
ScholarOne Customer Support by telephone (+1.434.817.2040 ext. 167); fax
(+1.434.817.2020); or e-mail (Support@ScholarOne.com).
Manuscripts will be assigned to an appropriate Senior Editor by the
Editor-in-Chief. Authors will be notified of this assignment by e-mail and
will be contacted by the Senior Editor when the initial review process is
completed. Correspondence with authors will be by e-mail and/or conventional
mail at the discretion of the Senior Editor. The final files submitted to
Manuscript Central and accepted by the Senior Editor will be used by the
editorial office for processing the manuscript for publication. Submission
implies nonsubmission elsewhere and (if accepted) no publication elsewhere
in the same form without consent.
An author receiving reviews and editorial recommendations for revision of a
manuscript has 3 months to complete the revision and return it to the
editor, again through Manuscript Central. Suggested revisions that
substantially change the author’s intent or appear to be in error may be
rebutted with a documented explanation to the editor when the revised
manuscript is returned. Unless authors have permission from the senior
editor for a brief delay in revision, manuscripts requiring more than 3
months for revision should be resubmitted as new manuscripts.
Authors can facilitate review and processing of their manuscripts by
reading this guide carefully and completing the checklist at the end of
these Instructions for Authors before they submit their papers.
For more information, contact the Editor-in-Chief:
Robert L. Gilbertson
University of California
Plant Pathology Department
1 Shields Ave.
Davis, CA 95616-5270
E-mail: rlgilbertson@ucdavis.edu
Telephone: +1.530.752.3163
Fax: +1.530.752.5674
or the Editorial Office:
Phytopathology
3340 Pilot Knob Road
St. Paul, MN 55121 U.S.A.
E-mail: ipfefer@scisoc.org
Telephone: +1.651.994.3869
Fax: +1.651.454.0766
Appropriateness for Phytopathology
The American Phytopathological Society publishes three
journals, each with a prescribed scope that should be considered in
determining the most appropriate journal for a manuscript. A description of
the emphasis of Phytopathology can be found in the “General
Publication Policies” found above or in the front of each issue of the journal.
Articles that relate primarily to the solution of specific disease problems
are more appropriate for an applied journal.
Authors should look at past issues of Phytopathology to verify
that a paper is appropriate for the journal. Research manuscripts should fit
into one of the sections of the journal: Analytical and Theoretical Plant
Pathology, Bacteriology, Biochemistry and Cell Biology, Biological Control,
Disease Control and Pest Management, Ecology and Epidemiology, Etiology,
Genetics and Resistance, Mycology, Nematology, Plant Stress and Abiotic
Disorders, Population Biology, Postharvest Pathology and Mycotoxins,
Techniques, and Virology.
Subject matter is not a criterion for judging the merit of an article for
publication in Phytopathology, though it is the author’s duty to
establish relevance to the science of plant pathology. Distinctions will be
made between what is routine and what is significant. The author should make
a clear case for the significance of the work in the article. The emphasis
in Phytopathology is on research that advances understanding of the
nature of plant diseases, the agents that cause them, their spread, the
losses they cause, and the measures that can be used to control them.
Reports of disease occurrence, of enzyme production in vitro, of routine
pesticide tests, of routine amino acid analyses, etc., are examples of work
that may be unacceptable unless the author relates it directly to new
concepts or to a more general in-depth understanding of plant disease.
Authors should display an awareness of previously published information on
the same subject and relate their findings to it—failure to do so is grounds
for rejection of a manuscript.
Papers that solely report complete or partial nucleotide sequences are
not acceptable for publication unless they relate structure to function or
demonstrate how the sequence information may advance our understanding of
the biology of the pathogen. Methods-type probe and marker papers should
meet one of the following criteria: (i) a report of new techniques or
modifications that significantly enhance current techniques or the
application of these methods, or (ii) the use of techniques to investigate
interesting biological questions that contribute to the basic concepts and
understanding of plant pathology.
Studies of pathogen population biology should address an original
question or hypothesis. In general, studies that describe pathogen
diversity or population structure are not acceptable unless they also
address a biological question that advances our conceptual knowledge of
pathogen population biology. In addition, as much care should be given to
the development and description of an appropriate pathogen sampling scheme
as is given to the subsequent procurement and analysis of marker data.
However, sampling deficiencies beyond the control of the author will be
acceptable in some cases, e.g., when conducting analyses of historical
isolate collections.
Papers dealing mainly with taxonomy, such as descriptions of
new taxa, should generally be submitted to a taxonomic journal. Taxonomic
papers that deal with classification, identification, and nomenclature
below the subspecies level may be submitted to Phytopathology.
APS Council has approved a biosecurity statement developed by the
Publications Board to provide journal editors with a policy to screen
potential articles for research that constitutes a misuse of plant
pathological methods or a potential danger to society from the improper
application of knowledge in our field. The full statement, which includes
guidelines for authors, editors-in-chief, and senior editors of all APS
journals, can be found at
http://www.apsnet.org/members/ppb/PDFs/BiosecurityAPSPubBoard
Policy.pdf.
Authors are encouraged to contact any of the Senior Editors prior to
submission of a manuscript to receive clarification concerning the
suitability of their manuscript for publication in Phytopathology.
Names and e-mail addresses of the Senior Editors can be found on the
editorial board page. The subject area responsibilities for the Senior Editors
are as follows: Vivian Blok: nematology, diversity and molecular
diagnostics of plant-parasitic nematodes, nematode–plant interactions, and
management of nematode diseases; Niklaus J. Grunwald: ecology,
epidemiology, genetics and population biology of fungal and oomycete plant
pathogens; Jeffrey B. Jones: phytobacteriology, prokaryotic plant
pathogens, disease management; Donald Y. Kobayashi: biological
control, phytobacteriology, molecular pathogen–plant interactions; Frank
Louws: integrated and sustainable disease management, microbial
ecology, disease diagnosis and pathogen detection; Neil McRoberts:
ecology and quantitative epidemiology, fungal pathogen–plant
interactions; Themis J. Michailides: ecology and epidemiology,
population biology, mycotoxins and integrated management of fungi; Eric
B. Nelson: soilborne plant pathogens, soil microbiology and rhizosphere
ecology, biological and cultural control, oomycete biology and ecology;
Nigel D. Paul: plant disease in natural ecosystems, ecology of plant
pathogens, pathogen–plant interactions; A. L. N. Rao: virology, virus
diseases, virus–plant interactions; Deborah A. Samac: fungal
molecular biology and genetics, host plant resistance, biological
control; Shree Singh: host plant resistance, genetics of disease
resistance; and Garry Sunter: virology, virus–plant interactions,
virus evolution and population biology.
Authors are encouraged to have colleagues review a manuscript before
submitting it for publication. Senior Editors may find the content of a
submitted paper unsuitable for Phytopathology and return the paper to
the author without review. Each manuscript receives two simultaneous
reviews. Authors may recommend individuals to review a manuscript, and
they also may ask that certain individuals not review a manuscript.
Additional authorities are consulted as necessary to confirm the scientific
merit of any part or all of a manuscript, with due consideration for
prepublication confidentiality. Each reviewer makes a specific
recommendation to the Senior Editor for the manuscript, based on the
following applicable aspects:
Importance of the research
Originality of the work
Analysis of previous literature
Appropriateness of the approach and experimental design
Adequacy of experimental techniques
Soundness of conclusions and interpretations
Relevance of discussion
Clarity of presentation and organization of the article
Demonstration of reproducibility
Letters to the Editor
Explain, amplify, or otherwise comment on research published in the
journal or elsewhere. The Editorial Board reserves the right to reject or
publish letters of rebuttal when appropriate.
Symposia
Symposia from an APS annual meeting may be published in
Phytopathology subject to the review process and to the policies,
procedures, and charges applicable to other articles. It is the
responsibility of the chair of the committee sponsoring the symposium to
contact the Editor-in-Chief before the symposium is presented.
Mini-Reviews
Mini-Reviews are submitted by authors who wish to provide an incisive
examination of the latest advances in a topic relevant to plant pathology.
They provide a survey of the development of a subject, with an emphasis on
the previous 5 years. Unlike basic research articles for Phytopathology,
whose primary audience is specialists in the field, Mini-Reviews should also
be written for nonspecialist scientists and advanced students. If you are
interested in submitting a Mini-Review, you should discuss the topic with
the Editor-in-Chief before you begin to write.
Analytical and Theoretical Papers
The Analytical and Theoretical Plant Pathology section publishes
research articles that use analytical, computational, and synthetic
approaches to provide new insights into an aspect of plant pathology.
Reported findings should significantly improve our understanding of plant
diseases and be corroborated by empirical information, when appropriate.
Manuscripts may have the following section format: Introduction (no title),
Theory and Approaches, Results, and Discussion. The section of Theory and
Approaches describes theories, methods, and materials (if any) used in the
study.
Online Article Enhancements
APS offers authors cost-effective “e-Xtra” options designed to
enhance the usefulness of the online versions of articles. Authors may
publish figures in color online that appear in black and white
in print ($20 per figure). Up to five external links to public
databases, such as GenBank, TreeBASE, or other approved websites, will be
provided free of charge (additional links at $5 per link) and linked to the
online abstract. Authors should submit links with their articles for review.
Supplemental materials, such as additional tables or figures, may be
linked to the online abstract ($20 per supplement). e-Xtra materials
are subject to review
and will be accepted in the following formats: MS Word, WordPerfect, MS
Excel, and .jpg formats. Supplemental materials should not be referred to
in the text of the article.
Authorship
Those who submit papers to Phytopathology should respect the value
of the research of their peers by not devaluing authorship. Each author
should have made a substantial intellectual contribution to the design,
conduct, analysis, or interpretation of the study. Each author must approve
the final version of the article to be published, and be willing to take
public responsibility for their contribution to the paper. In addition, the
first author and the corresponding author are expected to be able to take
public responsibility for the entire paper.
PREPARING A MANUSCRIPT
Organization of Text
Major sections after the introductory statements are
Materials and Methods, Results, Discussion, and Literature Cited. General
techniques and methods are described in Materials and Methods; brief
descriptions of experiments and trials are given in Results. (Subheadings
may be used, but avoid excessive fragmentation of the text.) Footnotes to
the text are not permitted. Please refer to published articles for
standard formatting of heads and subheads.
Scientific Nomenclature and Language
Scientific language—measurements, specialized vocabulary, and
nomenclature—is always in flux. Nevertheless, a manuscript should be
prepared such that there is internal consistency and attention is paid to
current standards of usage. Where legitimate differences in language and
nomenclature exist, the preferences of authors will be respected. Following
is a brief survey of guidelines and references that authors can consult as
they prepare their manuscripts, along with any APS Publications Board
policies that may apply to usage (a quick guide to APS editorial style is
provided below).
The ACS Style Guide (7) or ASA, CSA, and SSA Publications
Handbook and Style Manual (3) may be helpful for scientific language
and measurements.
Although APS publications do not generally follow it for copyediting
style, Scientific Style and Format (6) issued by the Council of
Biology Editors provides an excellent background on the origins of
scientific terms and the governing bodies that rule on current nomenclature
in a given field.
Apparatus and materials. Names of unusual proprietary
materials and special apparatus should be followed by the manufacturer’s
name and location in parentheses (e.g., manufacturer, city and state [United
States] or city and country). It is only necessary to cite these materials
by specific name if the work cannot otherwise be replicated. When
necessary, trade names may be used and should be capitalized; trademark
symbols should not be used and will be deleted before publication.
Authorities for Latin binomials. Citation of authorities for
Latin binomial names is optional but is appropriate for manuscripts dealing
with taxonomy or nomenclature or for organisms with unfamiliar binomials.
When used, authorities should be provided at first mention of the organism
only.
Bacteria. Spellings should be based on Bergey’s Manual of Systemic
Bacteriology (15), the Approved List of Bacterial Names (21), or
the lists of species validly published in the International Journal of
Systemic Bacteriology (IJSB). Based on Bergey’s Manual, groups
below the level of subspecies should be italicized. Where applicable,
designate strains.
Common names of plant diseases. APS has an established
committee to develop listings of approved common names for
plant diseases—the Committee on Standardization of Common Names for Plant
Diseases. These terms are official names for use in APS journals and
publications. Please refer to the online publication
Common Names of
Plant Diseases (1), available at APSnet under resources.
Chemicals, chemistry, and biochemistry terms. The ACS Style
Guide (7) describes conventions in chemistry and biochemistry. The
Merck Index (5) and Hawley’s Condensed Chemical Dictionary
(16) are good sources for spellings of chemical terms. List fungicides by
their approved common or generic names. Trade names may be included
parenthetically, but do not include manufacturers. See the current issue
of Farm Chemicals Handbook (2) or the most recent edition of Acceptable
Common Names and Chemical Names for the Ingredient Statement on Pesticide
Labels (8). Use the chemical name if a common name is not available.
Cultures. Indicate the source of cultures. Include culture
designations obtained from or deposited in recognized collections. Authors
are encouraged to deposit voucher cultures and specimens documenting their
research at recognized institutions and to cite the place of deposit in the
text. In addition, papers are accepted on the condition that recombinant
plasmids and bacteriophages, microbe strains, and plant variants developed
in the course of the research will be available for distribution to all
qualified members of the scientific community, either directly from the
investigator or by deposit in national or international collections. Though
designations from recognized collections should generally be provided,
avoid unnecessary use of arbitrary genotype designations in the text. For
example, “The avirulent isolate showed a larger colony diameter than did the
virulent isolate” is more informative than “Isolate ISF234 showed a larger
colony diameter than did isolate ABF672.”
Enzymes. Use the enzyme names recommended in the latest issue
of Enzyme Nomenclature (12). Give the number (classification) of the
enzyme at its first use (e.g., EC 1.1.75.6).
Genetics. Rieger et al. (20), Stenesh (22), and King and
Stansfield (14) are good specialized genetics and molecular biology
dictionaries.
Fungi. The preferred source for common and scientific names
and authorities of fungi is Fungi on Plants and Plant Products in the
United States (9). Ainsworth and Bisby’s Dictionary of the Fungi
(11) is another good reference.
Insects. Common Names of Insects and Related Organisms (23)
can be used to verify insect names.
Nucleotide or amino acid sequences. Accession numbers cited from
GenBank or other sequence databases must be provided. If the sequence is not
available for general access from the database when the manuscript is
submitted, a computer file or copy of sequences described in the manuscript
should be provided for reviewers.
Phylogenetic trees. Authors are encouraged to deposit phylogenetic
trees and data used to generate them in TreeBASE, and cite accession
number(s). If not deposited, authors of manuscripts may be required, at the
discretion of the Senior Editor, to provide unpublished sequences,
alignments, or other data used to construct phylogenies, for the sole
purpose of providing reviewers with sufficient data with which to evaluate
the submitted manuscript. As with the manuscript itself, any unpublished
information provided for the purpose of review will be considered
confidential.
Plants. Farr et al. (9) is a good source for spellings of
common and scientific names. Other good sources include Merriam-Webster’s
Collegiate Dictionary, 10th ed. (29), A Checklist of Names for 3,000
Vascular Plants of Economic Importance (25), and The Plant Book
(17). Use the term “cultivar” for cultivated agronomic and horticultural
varieties. Identify the source of the cultivars and include CI and PI
numbers when appropriate. The name of a cultivar may be preceded by the
abbreviation cv. or enclosed in single quotation marks.
Software. Software used should be treated as proprietary
material or apparatus. Give the manufacturer or developer name and location
parenthetically within the text. Software should not be listed in Literature
Cited.
Statistics. Describe statistical methods with enough detail to
enable a knowledgeable reader to verify the reported results. Give details
of randomization and blocking, as well as number of replications, blocks,
or observations. Clearly distinguish between true replications and
subsamples within a replication/treatment combination. Always specify the
experimental design and indicate whether the design was balanced. When means
(or medians) are followed by ±
x, indicate whether x refers to the standard deviation,
standard error, or half the confidence interval; error bars should similarly
be defined. Except for simple procedures (e.g., t tests, one-way
analysis of variance, simple linear regression), cite an appropriate and
accessible statistical text and indicate the computer program used. In
general, statistical techniques should be described in the Materials and
Methods. Avoid use of arbitrary significance cut-offs, such as
“significant or not significant at P = 0.05.” Instead, give the
achieved significance level for statistical tests (e.g., F was
significant at P = 0.03).
See Swallow (24) for a discussion of appropriate methods for statistical
comparison of treatments. In general, a multiple comparison procedure
(e.g., Duncan’s multiple range test or Fischer’s least significant
difference) should not be used when logical a priori comparisons can
be identified. Multiple comparison procedures can be used when logical
a priori comparisons are not identified, but the specific procedure
should be clearly indicated. When a quantitative factor (e.g., temperature)
is studied, it is often desirable to use regression instead of analysis of
variance (ANOVA). When ANOVA is used for this type of factor, orthogonal
polynomials are preferable to multiple comparisons. Even when a multiple
comparison procedure is used, it is desirable to specify one of the
following: mean square error, standard error of the difference, or the least
significant difference value (with specified P).
Whenever possible, researchers should consult with a statistician
before designing an experiment and when analyzing the results. The
following articles are good sources of information: Johnson and Berger
(13), Madden et al. (18), Swallow (24), and Gilligan (10).
Viruses. Guidelines provided in the Seventh Report of the
International Committee for the Taxonomy of Viruses (28), as described by
Mayo and Horzinek (19) and Van Regenmortel (27), will be followed. In
formal taxonomic usage, virus family, subfamily, and genus should be
capitalized and printed in italics. When used formally, the name of the
taxon should precede the term for the taxonomic unit, e.g., the family
Bunyaviridae and the genus Tospovirus. Formal use of a virus
species name also should be printed in italics, with the first word and any
subsequent proper noun capitalized, e.g., Wheat American striate mosaic
virus. Generally, the designation of the taxonomic unit “species” need
not precede the species name, e.g., Tomato spotted wilt virus need
not be written as the species Tomato spotted wilt virus. The first
use of a virus species name in a paper usually should be formal and,
therefore, italicized with the first word capitalized. Subsequent reference
to the same virus should be by the accepted acronym, which is not
italicized, e.g., TSWV. Virus names written in tables should be written
formally. The name of a tentative species whose taxonomic status is
uncertain should not be written in italics, but its first word (and any
proper nouns) should be capitalized.
In informal vernacular use, the virus family, subfamily, and genus should
be lowercase and not printed in italics. This generally does not apply to
virus species names, because acronyms are applied after the first use, which
is formal. The name of the taxon, if used, should follow the term for the
taxonomic unit, e.g., the tospovirus genus. When used informally, the name
of the taxon should not include the formal suffix, e.g., the bunyavirus
family, not the bunyaviridae family. Usually, these constructions should
simply be avoided, because they lead to unnecessary ambiguity. Formal
taxonomic usage is preferred, particularly when the formal family and genus
names have the same root terms, e.g., Bromoviridae and Bromovirus.
General Editorial Style
Most of the style guides mentioned previously have good discussions of
English, grammar, and style. Other good general references include The
Chicago Manual of Style (26) and Merriam-Webster’s Collegiate
Dictionary (29).
Citations. A citation should always be to the original source of
publication, whether print or online.
Literature cited. List references in alphabetic order by authors’
surnames. When citing multiple works by the same author, list articles by
one author before those by multiple authors. Determine the sequence by
alphabetizing the first author’s surname and subsequent authors’ surnames,
by the year of publication (most recent last), and, if necessary, by the
page numbers of articles published in the same journal. Italicize Latin
binomials, capitalize German nouns, and insert diacritical marks. List
specific pages of books. Refer to the BIOSIS List of Serials
(4) for accepted abbreviations of journal names. Do not abbreviate
one-word titles of journals. Double-check the accuracy of title
abbreviations, page and volume numbers, and dates and check that each
reference is cited in text.
Only references generally available through libraries should be listed in
Literature Cited. If a work cited is in preparation, submitted but not
accepted for publication, or not readily available in libraries, cite the
work parenthetically in the text, e.g., (J. Jones, unpublished data)
or (J. Jones, personal communication), not in Literature Cited.
Obtain written permission from the person(s) cited as the source of
unpublished information. A copy of the letter from the person supplying
information should be included as an e-mail attachment when submitting a
manuscript, or sent to the assigned Senior Editor by fax or mail. To cite an
article as in press, you must have a letter of acceptance from a journal or
book editor or have a copy of the galley proof for book chapters, bulletins,
etc. Avoid excessive reference to unpublished information.
Databases. Accession numbers cited from GenBank, EMBL, and other
databases for primary nucleotide or amino acid sequence data must be
provided and should be referenced as a footnote at the bottom of the first
page, in the figure legends, or in text.
Online publications. For literature citations of publications
available or referenced online that were originally published in
traditional print form, the original printed version should be cited.
Materials originally published online by established sources (the Senior
Editor will make the assessment of the online source) should be cited as
published online. Citation of online material should include author(s),
date, title, publication name or sponsoring organization, and publication
number or equivalent identifier (i.e., digital object identifier [DOI]
number), if any, e.g., Nadeem, A. 1997. Title. Mol. Plant Pathol. Online
publication /1997/0612nadeem. Do not reference the electronic address
or filename of the material, because electronic addresses and locations are
frequently changed. If information used in text can be found online
but is not from an established publication, it should be referenced in
text as a personal communication (requiring the same verification from the
authors as any other personal communication), e.g., (J. Jones, B. Myers, and
P. Johnson, personal communication). Online software, programs,
models, etc. that are used to analyze data should be cited in text by
referencing the sponsoring organization and program, e.g., NIH Image is
available online from the National Institute of Health.
Beginning in 2005, each article appearing in an APS journal has a unique
DOI number assigned to it for future reference.
It is the policy for APS journals to make changes to online pdf files if
an error occurs that requires publication of an erratum for that article. A
note will appear at the end of the revised file to describe the change.
Tables
Cite tables in numeric order in the manuscript. Tables should be
intelligible without reference to the text or another table. Do not repeat
data in the text that are given in a table or figure. The title should
summarize the information presented in the table without repeating the
subheadings. Subheadings should be brief.
Tables are used to present precise numerical data that show comparisons
or interrelationships. The minimum number of columns is two. Lists should be
incorporated into the text. Nonessential details should be omitted. Numbers
should be rounded to significant digits. Ditto marks should not be used.
Abbreviations are acceptable; explain any nonstandard abbreviations in
footnotes. Footnotes are designated with superscript lowercase letters.
Vertical and horizontal rules and bold type are not allowed in data fields.
Figures
General. Each submitted illustration should be labeled with the
figure number, author’s name, and Phytopathology. If the original
figure is a hard copy, it must be scanned and converted into a PDF file.
Captions should describe the contents so each illustration is
understandable when considered apart from the text. Cite all figures in
numeric order in the manuscript.
Numbers and lettering should be in a 10-point sans serif type (Helvetica
preferred) and bold; capitalize only the first word and proper nouns in each
label. Panel designations—A, B, C, etc.—should be uppercase letters in
an 18-point sans serif type that matches the font used for the rest of the
labeling. Keep font sizes consistent among figures.
Figures should be sized to fit one (88 mm) or two columns
(183 mm); maximum height is 250 mm, including caption.
Line drawings. Affix index marks to ordinates and abscissae. Avoid
too bold lettering, numbers, and lines for coordinate axes and curves.
Graphs should be “boxed” with tic marks on axes as needed. Use solid black
or white or hatch or stripe patterns in bar graphs (Fig. 1); shaded columns
do not reproduce well, either becoming “muddy” and indistinguishable or
fading to white. Use solid black and white symbols; shaded or screened
rules and symbols will not reproduce.
Only standard symbols (boxes, circles, triangles) or other typographic
elements should be used. If necessary, please provide a key to any symbols
as part of the figure (Fig. 2). Only standard symbols can be
reproduced in captions and may change in conversions. Portions of a
composite line drawing or graph should be provided as a single
illustration.
Fig. 1
Fig. 2
Digital image file specifications. Digital files must conform
to the following specifications. Files must be saved in .tif, .eps, or .jpg
format for IBM PC or in .tiff, .pict, .jpeg, or .eps format for Macintosh.
If high-resolution image files cannot be provided in the formats listed
above, we are sometimes able to convert image files generated with MS Office
programs or images embedded in text documents into the proper format.
Image resolution must be at least 360 ppi (600 ppi is preferred for line
art and figures with text) at the final printed image size. One-column
images must have a minimum of 1,260 pixels in width and two-column images a
minimum of 2,610 pixels. If the final printed image size is unknown, size
the image at a larger final print size, maintaining the required resolution,
and APS will downsample the image to fit the final print dimensions (to
maintain quality, APS cannot enlarge a digitized image).
Black-and-white images must be saved as grayscale images. Color images
should be saved in CMYK mode.
Photographs should be cropped at right angles to show essential details.
Scale bars should be inserted to indicate magnification. Images should be
clear and of high quality. Poor alignment, blurred lines, or out-of-focus
letters and symbols are not acceptable.
Color illustrations. Color figures may be used. The cost of color
reproduction must be paid by the authors (for current costs, see the
Page
Charges section above). If you have questions regarding figures, please contact Patti Ek at
pek@scisoc.org.
Illustrations (photographs, drawings, or diagrams) from an article or
related to an article may be submitted for consideration for the journal
cover. Such figures should be submitted through Manuscript Central as
Supplemental material and labeled as cover art followed by a caption.
Nucleotide and amino acid sequences may be supplied as computer files in
addition to the hard copy. These should be prepared at a maximum of 100
characters per line.
LITERATURE CITED
- American Phytopathological Society Committee on the Standardization of
Common Names for Plant Diseases. 2004. Common Names of Plant Diseases.
Published online by The American Phytopathological Society, St. Paul, MN.
- Anonymous. (Current) Farm Chemicals Handbook. Meister Publishing Co.,
Willoughby, OH.
- ASA, CSA, and SSA. 1988. Publications Handbook and Style Manual. ASA,
CSA, and SSA, Madison, WI.
- BIOSIS. (Current) Serial Sources for the BIOSIS Database. BIOSIS,
Philadelphia, PA.
- Budavari, S. 1989. The Merck Index. 11th ed. Merck & Co., Rahway,
NJ.
- CBE Style Manual Committee. 1994. Scientific Style and Format: The CBE
Manual for Authors, Editors, and Publishers. 6th ed. Cambridge University
Press, Cambridge.
- Dodd, J. S., ed. 1986. The ACS Style Guide. American Chemical Society,
Washington, DC.
- Environmental Protection Agency, Pesticide Regulation Division. (Current)
Acceptable Common Names and Chemical Names for the Ingredient Statement on
Pesticide Labels. EPA, Washington, DC.
- Farr, D. A., Bills, G. F., Chamuris, G. P., and Rossman, A. Y. 1989.
Fungi on Plants and Plant Products in the United States. The American
Phytopathological Society, St. Paul, MN.
- Gilligan, C. A. 1986. Use and misuse of the analysis of variance in plant
pathology. Pages 225-261 in: Advances in Plant Pathology, vol. 5. Academic
Press, New York.
- Hawksworth, D. L., Kirk, P. M., Sutton, B. C., and Pegler, D.N. 1995.
Ainsworth and Bisby’s Dictionary of the Fungi. 8th ed. CAB International,
Wallingford.
- International Union of Biochemistry. 1984. Enzyme Nomenclature 1984.
Academic Press, Orlando, FL.
- Johnson, S. B., and Berger, R. D. 1982. On the status of statistics in
phytopathology. Phytopathology 72:1014-1015.
- King, R. C., and Stansfield, W. D. 1990. A Dictionary of Genetics. 4th
ed. Oxford University Press, New York.
- Krieg, N. R., and Holt, J. G. (eds.) 1984. Bergey’s Manual of Systemic
Bacteriology. Vol. 1. Williams and Wilkins, Baltimore, MD.
- Lewis, R. J., Sr. 1993. Hawley’s Condensed Chemical Dictionary. 12th ed.
Van Nostrand-Reinhold, New York.
- Mabberley, D. J. 1987. The Plant-Book. Cambridge University Press,
Cambridge.
- Madden, L. V., Knoke, J. K., and Louie, R. 1982. Considerations for the
use of multiple comparison procedures in phytopathological investigations.
Phytopathology 72:1015-1017.
- Mayo, M. A., and Horzinek, M. 1998. A revised version of the
international code of virus classification and nomenclature. Arch. Virol.
143:1645-1654.
- Rieger, R., Michaelis, A., and Green, M. M. 1991. Glossary of Genetics:
Classical and Molecular. 5th ed. Springer-Verlag, New York.
- Skerman, V. B. D., McGowan, V., and Sneath, P. H. A. (eds.) 1980.
Approved Lists of Approved Bacterial Names. 2nd ed. American Society for
Microbiology, Washington, DC.
- Stenesh, J. 1989. Dictionary of Biochemistry and Molecular Biology. 2nd
ed. Wiley-Interscience, New York.
- Stoetzel, M. B. (ed.) 1989. Common Names of Insects and Related
Organisms. Entomological Society of America, Lanham, MD.
- Swallow, W. H. 1984. Those overworked and oft-misused mean separation
procedures—Duncan’s, LSD, etc. Plant Dis. 68:919-921.
- Terrell, E. E., Hill, S. R., Wiersema, J. H., and Rice, W. E. 1986. A
Checklist of Names of 3,000 Vascular Plants of Economic Importance. USDA
Handb. 505.
- University of Chicago Press. 1993. The Chicago Manual of Style.
University of Chicago Press, Chicago.
- Van Regenmortel, M. H. V. 1999. How to write the names of virus species.
Arch. Virol. 144:1041-1042.
- Van Regenmortel, M. H. V., Fauquet, C. M., Bishop, D. H. L., Carstens,
E., Estes, M., Lemon, S., McGeoch, D., Wickner, R. B., Mayo, M. A., Pringle,
C. R., and Maniloff, J. 1999. Virus Taxonomy. Seventh Report of the
International Committee for the Taxonomy of Viruses. Academic Press, New
York.
- Webster’s 10th New Collegiate Dictionary. 1994. Merriam-Webster,
Springfield, MA.
Quick Guide to APS Editorial Style
(see text of Instructions for more complete references)
Numbers
Numerals for measurements, including ad hoc measurements such as
drops, wells.
Commas in numbers of 4 digits or more (except for digits used as
designations).
Zero in front of decimal points.
In lists where one item is multidigit, use numerals throughout.
Spell out numbers at the beginning of a sentence (if number is spelled
out, unit of measure also should be spelled out).
-fold: threefold, manyfold, 10-fold.
Ranges: use "to" rather than "–," except in
tables.
Measurements
Do not abbreviate measurements in titles.
Time: second (s), minute (min), hour (h), day (day), week, month, year.
liter (spell out), but ml, µl, etc.
Use the degree symbol with temperature (70°C).
Binomials and trinomials
All taxa are italicized. In trinomials, always spell out species,
e.g., X.
campestris pv. campestris (not Xcc).
Molecular weight and Daltons
Correct: The molecular weight of protein x is 54,000.
The molecular mass of protein x is 54,000 Da [or 54 kDa].
Incorrect: The molecular weight of protein x is 54,000 Da [or 54
kDa].
Enumeration
Use (i), (ii), (iii), (iv).
Prefixes and suffixes
Generally should be closed up (e.g., postinfection, loopsful), even in
nonstandard constructions; see dictionary or style manuals for exceptions.
Compound words
When two words are used as adjectives preceding a noun, as a rule they
are hyphenated. If uncertain, consult the dictionary (29) or style
manuals.
Abbreviations
Consult ACS (7) and the short list below for the standard
abbreviations for common terms. Authors may coin abbreviations. Limit the
use of coined abbreviations to terms used frequently and unusually long
terms. Spell out the term and place the abbreviation in parentheses at
first use; use the abbreviation after that.
Common abbreviations and terms
aa--amino acids
Carborundum
Casamino Acids
Celite
CFU--colony-forming units, do not spell out if preceded by a numeral
cheesecloth
chi-square test or _2
cis, trans
cM--centimorgan, spell out at first use
Coomassie brilliant blue
df--degrees of freedom, do not spell out if preceded by a numeral
et al., not et al.
GLM--general linear model
gram negative, gram positive
Gram stain
LB broth--Luria-Bertani broth
LR white resin
Mab--monoclonal antibody
P--probability, do not spell out
Parafilm
phytoplasma, not MLO or mycoplasmalike organism
potato dextrose agar, not potato-dextrose agar
ppm--parts per million
Rf --retardation factor
V8 juice agar
Checklist for papers submitted to Phytopathology
Authors can expedite processing of their manuscripts by following the formatting
guidelines outlined below in preparing their manuscripts for submission to Phytopathology.
Content
-
Significance and originality of work are shown.
-
Reproducibility of results is illustrated.
-
Objectives are clearly stated in the introduction.
-
Introduction includes a succinct evaluation of the topic, including
all relevant literature citations.
-
Experimental design and methodology are fully explained.
-
Proper and sufficient analyses have been conducted (review by
qualified statistician before submission is encouraged).
-
Discussion relates work to other published material and addresses
strengths and weaknesses of research.
-
Major conclusions are supported by results from repeated
experiments.
-
Manuscript has been reviewed critically before
submission.
Format
Line-numbered paper, double-spaced (including tables and figure captions).
Typescript is 12 point.
First author’s name, page number, and Phytopathology in upper
right corner of each page.
Tables on numbered pages after Literature Cited section.
Captions for figures on a separate numbered page following the tables.
Section heads provided.
Title does not exceed 100 characters and spaces. (Do not include a
pathogen name in parentheses after a disease name unless essential for
clarity. Do not use both common and scientific names for organisms in the
title.)
Author name(s) listed under the title.
Affiliations, addresses, and acceptance date are given in separate
paragraphs beneath the author’s name. Acknowledgments are at the end of
the text. Disclaimers should be a footnote to the first page.
Corresponding author’s name and e-mail address are given before the
abstract.
Reference line is provided (authors, year, title, journal) under abstract
head.
Abstract is one paragraph limited to 200 words. Abstracts must be
included with all papers, except Obituaries.
Additional keywords are words or phrases not in the title or abstract but
are in the text and useful in index retrieval systems. Listed in alphabetic
order.
Organization of text
Major sections after the introductory statements are Materials and
Methods, Results, Discussion, and Literature Cited. General techniques
and methods are described in Materials and Methods; brief descriptions
of experiments and trials are given in Results. (Subheadings may be
used, but avoid excessive fragmentation of the text.) Footnotes to the
text are not permitted. Please refer to published articles for
standard formatting of heads and subheads.
Published references are listed in Literature Cited. References are
in alphabetic order by authors’ surnames. Citations in text are
given by number.
-
Digital images have been checked for adequate resolution.
Figures are boxed. The first letter of the first word of each label
is capitalized; all others are lowercase, except proper nouns.
Figures are prepared for same-size reproduction (88 or 183 mm wide;
maximum 250 mm deep, including caption). Consistent font style and
sizing is used for all figures.
Supporting material
Copy of first page or letter of acceptance is provided for all in
press citations. (The senior editor may request that preprints be
provided.)
Copies of personal communication verification are provided.
Permission has been granted for copyrighted material.
Accession numbers obtained for nucleotide and/or amino acid
sequences are provided as a footnote to the first page or in text.
Voucher cultures and specimens have been deposited in recognized
collections.
-
Illustrations (photographs, drawings, or diagram) from
an article or related to an article may be submitted for consideration
for the journal cover. Such figures should be labeled and include a
caption.
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