Research Priorities for the
American Phytopathological Society

1999

Overall Goal and Rationale

To promote health of plants and their products in sustainable agricultural, landscape, and forest ecosystems through environmentally sound and cost-effective approaches.

Plant diseases, whether manifested in the field or during storage and marketing, lower the yield of grain, fruit, or other plant parts; reduce aesthetic and/or nutritional quality; and cause food/feed safety problems with toxic microbial metabolites. Diseased plants also fail to utilize fertilizer and water effectively, compete poorly with weeds, and return less organic matter to the soil. Protection of the health of plants, thereby increasing plant yields, is a major contributor to sustainability and profitability. Lack of protection leads to phytosanitary and trade problems as well as decreased yields and profitability.

Plant pathology research has been at the cutting edge of increasing our basic understanding of host-pathogen interactions at the molecular level. Resistance genes and pathogenicity determinants have been cloned and characterized. Plant responses to entry by pathogens have been analyzed. Multidisciplinary teams of scientists, using technology to the maximum in approaches ranging from DNA chips to precision agriculture, continue to address the challenges and provide technology for practical applications.


Major High Priority Research Goals

1. Improve crop production and protection systems with plant-pathogen interaction knowledge.

Improvements are likely to come from extending crop yield potential through the power of functional genomics, and from designing production and protection systems in which crops can yield to their full genetic potential. At the same time pest management and long-term ecosystem stability, with needed productivity, must be balanced for quality and profitability.


2. Protect our natural resources through ecologically-based pest management.

Agriculture affects the environment in many ways, both positively and negatively. To assure natural resource protection and minimize environmental impacts, there must be an understanding of air, soil, water quality and water-use issues, and a scientific basis for sustainable management of the biologically complex agro-ecosystem.

3. Assure economic opportunities for U.S. agriculture with science-based risk assessments.

Profitability of agriculture in the United States is affected by crop yield, product marketability, government policies and regulations, international agreements and treaties, food safety and quality, and natural resource issues. Biotechnology, sanitary/phytosanitary standards, and other issues involve plant pathogens both nationally and globally. Producers need science-based decision aids that incorporate all these influences.


Research Priorities

1. Genomics: Apply genomic approaches in plant and microorganism research to provide the basic knowledge and technology required to increase the productivity of plants through resistance.

Conduct structural and functional genomics, initially focused on economically significant plant species.

Research to detect, map, analyze, and use of genes for pathogen resistance.

Detect, analyze and map pathogenicity genes and the nature of the interaction with host genes, to more knowledgeably design plants with durable resistance to pests.

Explore plant and microbial diversity and genetics to identify unique traits.

Examine pathogen germplasm diversity and molecular tools for systematics.

Explore commodity crops as well as other species that might have potential to possess a valuable trait such as a resistance factor.

Conduct structural and fundamental genomics on microbial, nematode, weed and other pest species.

Focus on genetic diversity and traits for adaptability to host resistance, biological and chemical controls, and survival in specific environments.

Find new approaches to providing crop varieties with genetic resistance to biological stresses, using genomic research to develop plants that resist disease-causing pathogens.

2. Natural Resource Protection: Develop practical, sustainable, ecologically-based pest management systems for the protection of the food and fiber supply and of the natural resource base of the planet.

Preserve, analyze and utilize genetic resources and diversity of germplasm of plants and associated organisms. Include viruses, phytoplasma, bacteria, fungi, and nematodes as pathogens associated with plants, and potentially beneficial microorganisms.

Improve the understanding of microbial pathogens and nematodes causing plant disease.

Find the critical, vulnerable aspects of pathogens' life cycle as a target for mitigation.

Examine factors influencing a pathogen's emergence and re-emergence

Address the issues of resistance management, food safety, and environmental impact raised by genetically improved and pest-resistant cultivars, including transgenic plants.

Design approaches that consider integrated chemical and biological pest management; use of multiple pathogen resistance genes, pesticides and weed management tools; impact of direct seeding/no-till practices; and crop selection.

Develop handling, post-harvest storage and processing systems to assure safety and quality while minimizing product loss. Particular attention is needed to bacterial and fungal pathogens.

Develop the science applied to site-specific agriculture, including precision agriculture, for profitable production and minimization of adverse environmental impact.

Define the biological and ecological processes that protect and sustain the renewable natural resources in particular sites.

Use emerging GIS and GPS technologies for information gathering and interpretation, to focus on how cropping and management practices influence pathogen or vector populations.

Define the physical, chemical and biological processes that improve soil health.

Expand on the potentially effective approach of managing soil-borne plant pathogens by indigenous or introduced microbial species.

Determine the biological processes influencing soil health, including microorganism and weed seed identity and diversity, and crop residue degradation.

Examine the role of plants in managing nutrient input and removal, as it relates to plant pathogens

3. Economic and Policy Development: Develop mechanisms to enhance producer profitability, while minimizing risk of financial loss and ensuring food safety and security.

Determine market needs and opportunities for current and potential products, such as pesticide-free foods and engineered resistant crops, and relate to products developed.

Conduct analyses of the scientific validity of national/international government policies and practices that impede marketing and trade (eg. pesticide, sanitary and phytosanitary regulations, and artificial trade barriers); assess the effectiveness of alternative government policies to assure food safety and quality, natural resource preservation, and evaluate risks of global distribution of invasive plant pathogens.

Carol Windels, President, APS
Sue A. Tolin, Past President


© Copyright 1999 by
The American Phytopathological Society

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