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Polycyclic Inoculum Production
For a polycyclic epidemic we can use essentially the same model as for a
monocyclic pathogen viewed over several seasons, where instead of repeating
the cycle season after season, we have many repeated cycles within the same
season. The time step becomes days or weeks instead of years, and
since the time steps are no longer necessarily one time unit (years), the time
increment is given as .
As a matter of notation, we will use a lower case to
represent the quantity of inoculum during the epidemic and a lower case
to represent the proportion by which inoculum increases in
each time step. The units of correspond to the units of
. For example, if the time is measured in days, the units of
would be proportion/day.
Inoculum production actually tends to occur irregularly in discontinuous,
discrete infection periods of differing lengths, depending on the weather, and
the value of would likely be different for each infection
period. However, in keeping with our objective of developing the simplest
model possible to be useful as a management tool, we will simplify the above
model by using uniform time steps and assuming a constant .
(Instead of having a that varies according to the
environmental conditions, we will use a value of "averaged"
over the whole epidemic.) We will first rearrange the above equation to get:
The change in the amount of inoculum in one time step, , is
simply the difference between the amount of inoculum at time
and the amount of inoculum at time :
Rearranging we get:
Now instead of advancing time in discrete steps, we will advance time
continuously, making infinitesimally small:
In this differential equation, is an infinitesimally small
change in the quantity of inoculum, and is an
infinitesimally small change in time. It tells us that the rate of change of
the quantity of inoculum is proportional to the quantity of inoculum at any
point in time. Using the calculus, this equation can be integrated to:
This, we see, is the familiar exponential function, where
is the initial inoculum, and is the base of the natural
(Napierian) logarithm. The instantaneous rate of change in
is , the slope of the tangent to the curve at any point.
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