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Education Center | Advanced Laboratory Exercises in Plant Pathology Electroporation and marker exchange of Pseudomonas syringae pv. syringae. SECTION II: Electroporation conditions can differ not only for bacterial species but also for strains within a species. Therefore, it is important to define the optimal parameters of electroporation for each bacterial strain. In this exercise, the parameters of electroporation are varied for the introduction of broad host range plasmids pRK415 or pUCP26 into three strains of Pseudomonas syringae pv. syringae: B301D, HS191, and B728a. The electroporation efficiencies for each set of conditions can be calculated, and optimal electroporation conditions for each strain can be determined. MATERIALS: Media
Bacterial strains pv. syringae strains
Broad host range plasmid DNA
Equipment
CLICK HERE FOR Instructor's Note 1
CLICK HERE FOR Instructor's Note 2 PROCEDURE: 1. Inoculate an NBY plate with freshly growing cells of P. syringae pv. syringae (strains B301D, HS191, B728a) (<24 h old) using a sterile loop, so that a lawn of bacteria will grow. Incubate the petri plate at 25°C overnight (~16 h). The bacteria should be in exponential to early stationary phase. Using bacterial cells in late stationary phase can reduce the efficiency of electroporation; therefore, cultures greater than 24-h old should not be used.
2. Resuspend the bacterial lawn using 4 ml of cold sterile distilled water (SDW). Be careful not to resuspend small pieces of agar, because the presence of agar in the bacterial suspension will decrease the electroporation efficiency. It is important to keep the bacterial cells on ice throughout the procedure to increase the electroporation efficiency. 3. Transfer the suspension to 1.5 ml microfuge tubes and pellet the cells (14,000 rpm for 1 min). 4. Resuspend each microfuge tube of cells in 1 ml cold SDW and repeat step 3 twice. After the second wash, resuspend the cells in ~400 µl of cold SDW for each petri plate of cells and place the microfuge tube of cells on ice. Remove a 5 µl aliquot and determine the cell concentration by dilution plating. CLICK HERE FOR Instructor's Note 3 5. Electroporator settings.
CLICK HERE FOR Instructor's Note 4 6. Pipet 60 µl of bacterial cells into a 0.5 ml microfuge tube with 100-500 ng of plasmid pRK415 or pUCP26 DNA and mix gently. 7. Pipet bacterial cells and the DNA suspension into an electroporation cuvette and electroporate. CLICK HERE FOR Instructor's Note 5 8. Dilute the electroporation mix with 1 ml of SOC and place it in a test tube with 4 ml of SOC. Incubate with shaking at 25°C for 4 h. 9. Remove 1 ml aliquots and pellet the entire 5 ml culture in 1.5 ml microfuge tubes (14,000 rpm for 1 min). 10. Resuspend the bacterial cells in 200 µl of NBY broth per microfuge tube. Transfer 100 µl aliquots onto NBY agar plus appropriate selection (i.e., Tc for pRK415 and pUCP26) and spread evenly over the agar surface using a sterile glass hockey stick. Incubate the plates at 25°C for 48 h. 11. Pick colonies that grow after 48 h and streak for single colonies onto NBY agar plus appropriate selection to confirm the transformation. Incubate the petri plates at 25°C for 48 h. 12. Colonies that grow and are Tcr should carry the broad host range plasmid. Confirm the presence of the plasmid within these colonies by isolating plasmid DNA and checking it on agarose gels. CLICK HERE FOR Instructor's Note 6 OBSERVATIONS: Calculate the electroporation frequency for each strain at each electroporation condition. This is reported as transformants/µg DNA.
Efficiencies of transformation
can vary but generally an electroporation efficiency of 1 x 105
transformants/µg DNA is attained
for pUCP26, and an electroporation efficiency of 1 x 104
transformants/µg DNA is attained
for pRK415 when electroporated into P. syringae pv. syringae
strain B301D with a voltage of 1.8 kV/cm and a resistance of 200 QUESTIONS FOR DISCUSSION: 1. What were the most effective conditions for electroporation of each strain of P. syringae pv. syringae? 2. Which variable, the resistance or the voltage, exhibits the greater effect on the efficiency of electroporation in P. syringae pv. syringae strains? 3. How does plasmid size affect the electroporation efficiency in each strain? Instructors can find suggested answers to these discussion questions at: http://www.apsnet.org/education/InstructorCommunication/ExamQA/Top.html CLICK HERE FOR Instructor's Note 7 © Copyright 2001 by The American Phytopathological Society American Phytopathological Society |